Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.37□□□□□ -0.91
Sap30O88574 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Gm13296-201ENSMUST00000117854 997 ntBASIC9.37□□□□□ -0.91
Sap30O88574 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.37□□□□□ -0.91
Sap30O88574 Gm12314-201ENSMUST00000118104 538 ntBASIC9.37□□□□□ -0.91
Sap30O88574 Gm14832-201ENSMUST00000121289 322 ntBASIC9.37□□□□□ -0.91
Sap30O88574 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Sap30O88574 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Gm2260-201ENSMUST00000184965 657 ntBASIC9.37□□□□□ -0.91
Sap30O88574 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.37□□□□□ -0.91
Sap30O88574 Gm44262-201ENSMUST00000204969 372 ntBASIC9.37□□□□□ -0.91
Sap30O88574 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Sap30O88574 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sap30O88574 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.37□□□□□ -0.91
Sap30O88574 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sap30O88574 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Sap30O88574 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Gm15703-201ENSMUST00000120250 880 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.36□□□□□ -0.91
Sap30O88574 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Gm24845-201ENSMUST00000158034 109 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.36□□□□□ -0.91
Sap30O88574 Rprl1-202ENSMUST00000198476 238 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Rps4l-202ENSMUST00000204242 789 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Gm19208-201ENSMUST00000213861 912 ntBASIC9.36□□□□□ -0.91
Sap30O88574 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sap30O88574 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Gm8385-201ENSMUST00000058999 643 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Lrtm1-203ENSMUST00000224760 3060 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.36□□□□□ -0.91
Sap30O88574 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.36□□□□□ -0.91
Sap30O88574 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.36□□□□□ -0.91
Sap30O88574 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sap30O88574 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms