Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf13O54965 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rnf13O54965 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rnf13O54965 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.79□□□□□ -0.68
Rnf13O54965 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rnf13O54965 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.79□□□□□ -0.68
Rnf13O54965 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm12058-201ENSMUST00000118614 437 ntBASIC10.79□□□□□ -0.68
Rnf13O54965 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.79□□□□□ -0.68
Rnf13O54965 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.79□□□□□ -0.68
Rnf13O54965 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rnf13O54965 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm37201-201ENSMUST00000191845 523 ntBASIC10.79□□□□□ -0.68
Rnf13O54965 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.79□□□□□ -0.68
Rnf13O54965 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.79□□□□□ -0.68
Rnf13O54965 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rnf13O54965 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rnf13O54965 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.78□□□□□ -0.68
Rnf13O54965 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.78□□□□□ -0.68
Rnf13O54965 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Gm14247-201ENSMUST00000120950 237 ntBASIC10.78□□□□□ -0.68
Rnf13O54965 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.78□□□□□ -0.68
Rnf13O54965 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.78□□□□□ -0.68
Rnf13O54965 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Rprl1-201ENSMUST00000158050 327 ntBASIC10.78□□□□□ -0.68
Rnf13O54965 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.78□□□□□ -0.68
Rnf13O54965 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.78□□□□□ -0.68
Rnf13O54965 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rnf13O54965 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rnf13O54965 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rnf13O54965 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Rnf13O54965 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf13O54965 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf13O54965 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf13O54965 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf13O54965 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rnf13O54965 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms