Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ChkaO54804 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ChkaO54804 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ChkaO54804 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.05□□□□□ -0.48
ChkaO54804 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ChkaO54804 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ChkaO54804 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.05□□□□□ -0.48
ChkaO54804 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.05□□□□□ -0.48
ChkaO54804 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.05□□□□□ -0.48
ChkaO54804 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.05□□□□□ -0.48
ChkaO54804 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.05□□□□□ -0.48
ChkaO54804 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Gm6334-201ENSMUST00000207083 228 ntBASIC12.05□□□□□ -0.48
ChkaO54804 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Gm7399-201ENSMUST00000032395 858 ntBASIC12.05□□□□□ -0.48
ChkaO54804 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.05□□□□□ -0.48
ChkaO54804 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.05□□□□□ -0.48
ChkaO54804 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ChkaO54804 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ChkaO54804 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.04□□□□□ -0.48
ChkaO54804 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ChkaO54804 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.04□□□□□ -0.48
ChkaO54804 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Gm23270-201ENSMUST00000104055 131 ntBASIC12.04□□□□□ -0.48
ChkaO54804 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Gm14644-201ENSMUST00000116671 647 ntBASIC12.04□□□□□ -0.48
ChkaO54804 Gm26956-201ENSMUST00000182176 986 ntBASIC12.04□□□□□ -0.48
ChkaO54804 Gm18935-201ENSMUST00000212692 664 ntBASIC12.04□□□□□ -0.48
ChkaO54804 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.04□□□□□ -0.48
ChkaO54804 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ChkaO54804 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
ChkaO54804 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ChkaO54804 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ChkaO54804 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
ChkaO54804 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
ChkaO54804 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.03□□□□□ -0.48
ChkaO54804 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.03□□□□□ -0.48
ChkaO54804 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ChkaO54804 Gm11989-201ENSMUST00000117240 672 ntBASIC12.03□□□□□ -0.48
ChkaO54804 Gm11362-201ENSMUST00000118838 850 ntBASIC12.03□□□□□ -0.48
ChkaO54804 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.03□□□□□ -0.48
ChkaO54804 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ChkaO54804 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ChkaO54804 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ChkaO54804 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.03□□□□□ -0.48
ChkaO54804 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
ChkaO54804 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms