Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.66□□□□□ -0.54
Npc1O35604 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.66□□□□□ -0.54
Npc1O35604 Gm8343-201ENSMUST00000182705 994 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Mir7070-201ENSMUST00000183657 86 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Mir6927-201ENSMUST00000184494 71 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Gm28450-201ENSMUST00000187349 638 ntBASIC11.66□□□□□ -0.54
Npc1O35604 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.66□□□□□ -0.54
Npc1O35604 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.66□□□□□ -0.54
Npc1O35604 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Npc1O35604 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.66□□□□□ -0.54
Npc1O35604 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.66□□□□□ -0.54
Npc1O35604 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Npc1O35604 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.66□□□□□ -0.54
Npc1O35604 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Npc1O35604 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Npc1O35604 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.65□□□□□ -0.54
Npc1O35604 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.65□□□□□ -0.54
Npc1O35604 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Gm12217-201ENSMUST00000118858 696 ntBASIC11.65□□□□□ -0.54
Npc1O35604 Gm14247-201ENSMUST00000120950 237 ntBASIC11.65□□□□□ -0.54
Npc1O35604 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.65□□□□□ -0.54
Npc1O35604 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Npc1O35604 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.65□□□□□ -0.54
Npc1O35604 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Npc1O35604 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.65□□□□□ -0.54
Npc1O35604 Gm8956-201ENSMUST00000203939 825 ntBASIC11.65□□□□□ -0.54
Npc1O35604 Gm4157-201ENSMUST00000211647 679 ntBASIC11.65□□□□□ -0.54
Npc1O35604 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.65□□□□□ -0.54
Npc1O35604 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Npc1O35604 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Npc1O35604 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Npc1O35604 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Npc1O35604 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.64□□□□□ -0.55
Npc1O35604 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.64□□□□□ -0.55
Npc1O35604 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.64□□□□□ -0.55
Npc1O35604 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Gm26286-201ENSMUST00000104166 134 ntBASIC11.64□□□□□ -0.55
Npc1O35604 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.64□□□□□ -0.55
Npc1O35604 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.64□□□□□ -0.55
Npc1O35604 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Npc1O35604 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Gm5706-201ENSMUST00000181525 993 ntBASIC11.64□□□□□ -0.55
Npc1O35604 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npc1O35604 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms