Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Stx1aO35526 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Stx1aO35526 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.37□□□□□ -0.27
Stx1aO35526 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Stx1aO35526 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Stx1aO35526 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Stx1aO35526 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.37□□□□□ -0.27
Stx1aO35526 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Stx1aO35526 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 BC043934-202ENSMUST00000185694 2356 ntBASIC13.37□□□□□ -0.27
Stx1aO35526 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.37□□□□□ -0.27
Stx1aO35526 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.37□□□□□ -0.27
Stx1aO35526 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.36□□□□□ -0.27
Stx1aO35526 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.36□□□□□ -0.27
Stx1aO35526 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Stx1aO35526 Gm14832-201ENSMUST00000121289 322 ntBASIC13.36□□□□□ -0.27
Stx1aO35526 Gm12164-201ENSMUST00000121695 551 ntBASIC13.36□□□□□ -0.27
Stx1aO35526 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.36□□□□□ -0.27
Stx1aO35526 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.36□□□□□ -0.27
Stx1aO35526 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Stx1aO35526 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.36□□□□□ -0.27
Stx1aO35526 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Stx1aO35526 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.36□□□□□ -0.27
Stx1aO35526 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.36□□□□□ -0.27
Stx1aO35526 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.36□□□□□ -0.27
Stx1aO35526 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Stx1aO35526 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Stx1aO35526 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Stx1aO35526 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Stx1aO35526 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.35□□□□□ -0.27
Stx1aO35526 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.35□□□□□ -0.27
Stx1aO35526 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Stx1aO35526 Gm24845-201ENSMUST00000158034 109 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Gm25043-201ENSMUST00000158604 212 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.35□□□□□ -0.27
Stx1aO35526 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Stx1aO35526 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Gm19994-201ENSMUST00000217086 586 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Stx1aO35526 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Stx1aO35526 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.35□□□□□ -0.27
Stx1aO35526 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Stx1aO35526 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms