Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf11bO08712 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Tnfrsf11bO08712 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm13392-201ENSMUST00000117708 150 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm11700-201ENSMUST00000119409 403 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm14726-201ENSMUST00000120623 896 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm5070-201ENSMUST00000177599 862 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm31256-201ENSMUST00000194705 506 ntBASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf11bO08712 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm11930-201ENSMUST00000117788 190 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm6963-201ENSMUST00000147879 379 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm2991-201ENSMUST00000173338 480 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm19187-201ENSMUST00000206781 892 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm10478-201ENSMUST00000084451 396 ntBASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf11bO08712 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms