Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm25554-201ENSMUST00000158075 113 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gm20392-201ENSMUST00000173047 701 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gm18463-201ENSMUST00000207258 474 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gm18460-201ENSMUST00000208088 464 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gm16380-201ENSMUST00000077997 478 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
B020004C17RikJ3QP07 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm25053-201ENSMUST00000103982 133 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm25922-201ENSMUST00000104281 130 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm24679-201ENSMUST00000158762 111 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm43163-201ENSMUST00000196571 442 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm25053-202ENSMUST00000199731 132 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
B020004C17RikJ3QP07 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
B020004C17RikJ3QP07 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm22146-201ENSMUST00000157397 288 ntBASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm44124-201ENSMUST00000204159 472 ntBASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm4604-201ENSMUST00000025040 390 ntBASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms