Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.38□□□□□ -0.11
NpcdF8VQB8 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.38□□□□□ -0.11
NpcdF8VQB8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Gm9507-202ENSMUST00000180157 654 ntBASIC14.38□□□□□ -0.11
NpcdF8VQB8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Gm3726-201ENSMUST00000203110 785 ntBASIC14.38□□□□□ -0.11
NpcdF8VQB8 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.38□□□□□ -0.11
NpcdF8VQB8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NpcdF8VQB8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm14807-201ENSMUST00000116640 983 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm10169-201ENSMUST00000121822 348 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm17214-201ENSMUST00000164501 541 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm18367-201ENSMUST00000176139 600 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm12407-201ENSMUST00000180219 324 ntBASIC14.37□□□□□ -0.11
NpcdF8VQB8 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.37□□□□□ -0.11
NpcdF8VQB8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NpcdF8VQB8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Gm14892-201ENSMUST00000117636 267 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Gm15003-201ENSMUST00000118884 446 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Gm42790-201ENSMUST00000201268 969 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Gm5451-201ENSMUST00000080545 579 ntBASIC14.36□□□□□ -0.11
NpcdF8VQB8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms