Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Gm13829-201ENSMUST00000119600 138 ntBASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Gm45784-201ENSMUST00000188360 142 ntBASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Gm17931-201ENSMUST00000208132 634 ntBASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 AC132260.2-201ENSMUST00000224482 344 ntBASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm14441-201ENSMUST00000121960 540 ntBASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm27731-201ENSMUST00000185192 107 ntBASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm37201-201ENSMUST00000191845 523 ntBASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdh1F7BJK1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh1F7BJK1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh1F7BJK1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdh1F7BJK1 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms