Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm12029-201ENSMUST00000120073 832 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm13263-201ENSMUST00000121271 838 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm14665-201ENSMUST00000122294 557 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm17391-201ENSMUST00000171036 126 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Srp54bE9PXC0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm15573-201ENSMUST00000119487 540 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm15881-201ENSMUST00000148792 942 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm5706-201ENSMUST00000181525 993 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Mir7032-201ENSMUST00000185154 79 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm2553-201ENSMUST00000215986 605 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.79□□□□□ -0.52
Srp54bE9PXC0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms