Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.69□□□□□ -0.54
Chd3B1AR17 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.69□□□□□ -0.54
Chd3B1AR17 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Chd3B1AR17 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chd3B1AR17 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.69□□□□□ -0.54
Chd3B1AR17 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Gm13047-201ENSMUST00000117116 815 ntBASIC11.69□□□□□ -0.54
Chd3B1AR17 Gm15610-201ENSMUST00000120584 195 ntBASIC11.69□□□□□ -0.54
Chd3B1AR17 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.69□□□□□ -0.54
Chd3B1AR17 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.69□□□□□ -0.54
Chd3B1AR17 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd3B1AR17 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.69□□□□□ -0.54
Chd3B1AR17 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.68□□□□□ -0.54
Chd3B1AR17 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Mir1943-201ENSMUST00000158276 73 ntBASIC11.68□□□□□ -0.54
Chd3B1AR17 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.68□□□□□ -0.54
Chd3B1AR17 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Chd3B1AR17 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Chd3B1AR17 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd3B1AR17 Gm15573-201ENSMUST00000119487 540 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm4726-201ENSMUST00000135604 736 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm6019-201ENSMUST00000148369 736 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm15881-201ENSMUST00000148792 942 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm10807-201ENSMUST00000177134 795 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm7504-201ENSMUST00000201449 424 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm44980-201ENSMUST00000205826 314 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd3B1AR17 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd3B1AR17 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms