Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc112A0AUP1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Gm11793-201ENSMUST00000120433 981 ntBASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc112A0AUP1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm14644-201ENSMUST00000116671 647 ntBASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm18187-201ENSMUST00000196476 984 ntBASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.6□□□□□ -0.23
Ccdc112A0AUP1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Gm37424-201ENSMUST00000191727 561 ntBASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms