Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gm19165-201ENSMUST00000204453 1982 ntBASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 AC192088.1-201ENSMUST00000227561 301 ntBASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gm7537-201ENSMUST00000221660 1414 ntBASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Gm6263-201ENSMUST00000120029 1342 ntBASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Phtf1os-201ENSMUST00000160110 4046 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm19327-201ENSMUST00000220651 3271 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm23935-201ENSMUST00000102303 57 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm24270-201ENSMUST00000102326 57 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm24245-201ENSMUST00000157318 57 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm28760-201ENSMUST00000185995 736 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm43575-201ENSMUST00000196420 516 ntBASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav8-1A0A075B641 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms