Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm22323-201ENSMUST00000103832 109 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm27320-201ENSMUST00000184892 109 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 AA914427-201ENSMUST00000193194 1166 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm38317-201ENSMUST00000195564 343 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm8956-201ENSMUST00000203939 825 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb2S4R1M3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gm13296-201ENSMUST00000117854 997 ntBASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gm37259-201ENSMUST00000193903 849 ntBASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.92□□□□□ -0.5
H2afb2S4R1M3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms