Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm13829-201ENSMUST00000119600 138 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm2546-201ENSMUST00000182630 991 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb3S4R1G7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm13875-201ENSMUST00000120162 282 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Mir1982-201ENSMUST00000157368 74 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Snora78-201ENSMUST00000158630 128 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm27514-201ENSMUST00000183692 110 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm18187-201ENSMUST00000196476 984 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb3S4R1G7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms