Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.05□□□□□ -0.64
Upk1bQ9Z2C6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm27847-201ENSMUST00000183711 107 ntBASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm27375-201ENSMUST00000183799 107 ntBASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk1bQ9Z2C6 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Gm4984-201ENSMUST00000115987 360 ntBASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Gm15610-201ENSMUST00000120584 195 ntBASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Gm13570-201ENSMUST00000140763 309 ntBASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk1bQ9Z2C6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms