Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AmfrQ9R049 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AmfrQ9R049 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.37□□□□□ -0.27
AmfrQ9R049 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.37□□□□□ -0.27
AmfrQ9R049 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.37□□□□□ -0.27
AmfrQ9R049 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.37□□□□□ -0.27
AmfrQ9R049 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
AmfrQ9R049 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
AmfrQ9R049 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AmfrQ9R049 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.36□□□□□ -0.27
AmfrQ9R049 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.36□□□□□ -0.27
AmfrQ9R049 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm29199-201ENSMUST00000187766 775 ntBASIC13.36□□□□□ -0.27
AmfrQ9R049 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.36□□□□□ -0.27
AmfrQ9R049 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.36□□□□□ -0.27
AmfrQ9R049 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.36□□□□□ -0.27
AmfrQ9R049 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AmfrQ9R049 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms