Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Gm11989-201ENSMUST00000117240 672 ntBASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Gm11362-201ENSMUST00000118838 850 ntBASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Gm19208-201ENSMUST00000213861 912 ntBASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Mir5132-201ENSMUST00000175166 71 ntBASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Mir6927-201ENSMUST00000184494 71 ntBASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Gm28450-201ENSMUST00000187349 638 ntBASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Gm7003-201ENSMUST00000195089 312 ntBASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clcf1Q9QZM3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm5616-201ENSMUST00000165252 384 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm8741-201ENSMUST00000174736 384 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm25732-201ENSMUST00000175168 60 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 AY036118-201ENSMUST00000200021 923 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms