Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk3aQ9JKX8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm14724-201ENSMUST00000118400 537 ntBASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 AU022133-201ENSMUST00000200601 873 ntBASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk3aQ9JKX8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm23200-201ENSMUST00000104379 132 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm11663-201ENSMUST00000117888 290 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm7857-201ENSMUST00000117957 358 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm11700-201ENSMUST00000119409 403 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm28937-201ENSMUST00000185413 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm29400-201ENSMUST00000187208 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm28450-201ENSMUST00000187349 638 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm28662-201ENSMUST00000188446 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm28251-201ENSMUST00000188835 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm37318-201ENSMUST00000194325 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm38017-201ENSMUST00000194768 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm37287-201ENSMUST00000195449 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Gm37793-201ENSMUST00000195548 695 ntBASIC11.46□□□□□ -0.57
Upk3aQ9JKX8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms