Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mir3113-201ENSMUST00000175478 76 ntBASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm24447-201ENSMUST00000083977 338 ntBASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smco4Q9JIS3 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm43112-201ENSMUST00000196665 3122 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm9103-201ENSMUST00000119371 405 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm9727-201ENSMUST00000161387 555 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.51□□□□□ -0.89
Smco4Q9JIS3 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm25287-201ENSMUST00000103846 110 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Gm22918-201ENSMUST00000103855 110 ntBASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smco4Q9JIS3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms