Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.25□□□□□ -0.61
Rtp4Q9ER80 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm12176-201ENSMUST00000121420 875 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm22885-201ENSMUST00000157410 107 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm37666-201ENSMUST00000194110 866 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rtp4Q9ER80 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm9083-201ENSMUST00000120423 819 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Mir3547-201ENSMUST00000175461 88 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm27552-201ENSMUST00000183351 62 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm27844-201ENSMUST00000183613 62 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms