Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.36□□□□□ -0.75
Lime1Q9EQR5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lime1Q9EQR5 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lime1Q9EQR5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lime1Q9EQR5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lime1Q9EQR5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gm12015-201ENSMUST00000117065 843 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gm4986-201ENSMUST00000119731 549 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.35□□□□□ -0.75
Lime1Q9EQR5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm9230-201ENSMUST00000188228 532 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm19309-201ENSMUST00000218295 205 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Gm807-202ENSMUST00000224929 408 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Morn2-202ENSMUST00000227729 656 ntBASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lime1Q9EQR5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms