Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Gm5455-201ENSMUST00000058710 715 ntBASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chmp4bQ9D8B3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Gm38187-201ENSMUST00000195609 4709 ntBASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp4bQ9D8B3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm13665-201ENSMUST00000120830 528 ntBASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm11660-201ENSMUST00000120955 412 ntBASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm9136-201ENSMUST00000193368 454 ntBASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm43758-201ENSMUST00000199500 367 ntBASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm4607-201ENSMUST00000206649 577 ntBASIC15.05■□□□□ -0
Chmp4bQ9D8B3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Chmp4bQ9D8B3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm27320-201ENSMUST00000184892 109 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm38317-201ENSMUST00000195564 343 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm43962-201ENSMUST00000203898 190 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Rgr-203ENSMUST00000225070 4704 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 AC129336.1-201ENSMUST00000220224 2277 ntBASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp4bQ9D8B3 Gm42913-201ENSMUST00000197936 1853 ntBASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms