Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.97□□□□□ -0.17
Rufy3Q9D394 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Gm45598-202ENSMUST00000210719 986 ntBASIC13.97□□□□□ -0.17
Rufy3Q9D394 Gm5455-201ENSMUST00000058710 715 ntBASIC13.97□□□□□ -0.17
Rufy3Q9D394 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.97□□□□□ -0.17
Rufy3Q9D394 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rufy3Q9D394 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.96□□□□□ -0.17
Rufy3Q9D394 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.96□□□□□ -0.17
Rufy3Q9D394 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gm38314-201ENSMUST00000195709 625 ntBASIC13.96□□□□□ -0.17
Rufy3Q9D394 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.96□□□□□ -0.17
Rufy3Q9D394 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rufy3Q9D394 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rufy3Q9D394 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Rufy3Q9D394 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rufy3Q9D394 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rufy3Q9D394 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rufy3Q9D394 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rufy3Q9D394 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.95□□□□□ -0.18
Rufy3Q9D394 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rufy3Q9D394 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.95□□□□□ -0.18
Rufy3Q9D394 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rufy3Q9D394 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Rufy3Q9D394 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rufy3Q9D394 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rufy3Q9D394 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rufy3Q9D394 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms