Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm28882-201ENSMUST00000185504 314 ntBASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Shmt2Q9CZN7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Gm24255-201ENSMUST00000104481 128 ntBASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Gm13350-201ENSMUST00000120519 479 ntBASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shmt2Q9CZN7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Gm11930-201ENSMUST00000117788 190 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Gm23119-201ENSMUST00000158610 140 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Gm3096-201ENSMUST00000185770 364 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shmt2Q9CZN7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms