Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Otud1Q9CUB6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Map1b-203ENSMUST00000223725 2669 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm12266-201ENSMUST00000120311 962 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm18893-201ENSMUST00000198416 943 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm44251-201ENSMUST00000204963 442 ntBASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Otud1Q9CUB6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Otud1Q9CUB6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Otud1Q9CUB6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Otud1Q9CUB6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Otud1Q9CUB6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Otud1Q9CUB6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Otud1Q9CUB6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Gm12566-201ENSMUST00000121479 359 ntBASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Otud1Q9CUB6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms