Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm12036-201ENSMUST00000120008 530 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm11591-201ENSMUST00000120063 702 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm8738-201ENSMUST00000172606 329 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm44405-201ENSMUST00000198952 126 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm7809-201ENSMUST00000153199 742 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Snora73a-201ENSMUST00000082453 205 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska1Q9CPV1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Gm13226-201ENSMUST00000117838 404 ntBASIC11.29□□□□□ -0.6
Ska1Q9CPV1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska1Q9CPV1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms