Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Krt88Q9CPR6 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Krt88Q9CPR6 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Krt88Q9CPR6 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Krt88Q9CPR6 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.77□□□□□ -0.69
Krt88Q9CPR6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Gm11439-201ENSMUST00000118598 409 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Gm42693-201ENSMUST00000196779 631 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 BC043934-202ENSMUST00000185694 2356 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Krt88Q9CPR6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gm12502-201ENSMUST00000120197 444 ntBASIC10.75□□□□□ -0.69
Krt88Q9CPR6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Krt88Q9CPR6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms