Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim8Q99PJ2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm25261-201ENSMUST00000157416 134 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm43818-201ENSMUST00000200605 466 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm43630-201ENSMUST00000201550 776 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm45930-201ENSMUST00000221330 292 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm9899-201ENSMUST00000065519 555 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Gm44745-201ENSMUST00000206563 2723 ntBASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim8Q99PJ2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim8Q99PJ2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms