Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msh4Q99MT2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm6963-201ENSMUST00000147879 379 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm26361-201ENSMUST00000158868 186 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm5070-201ENSMUST00000177599 862 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm44882-201ENSMUST00000205702 802 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.65□□□□□ -0.54
Msh4Q99MT2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh4Q99MT2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Msh4Q99MT2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Msh4Q99MT2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Msh4Q99MT2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Msh4Q99MT2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Msh4Q99MT2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Msh4Q99MT2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm12015-201ENSMUST00000117065 843 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.64□□□□□ -0.55
Msh4Q99MT2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.64□□□□□ -0.55
Msh4Q99MT2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms