Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col25a1Q99MQ5 Rubie-203ENSMUST00000227803 2430 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm12986-201ENSMUST00000119037 967 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm23400-201ENSMUST00000174994 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm26463-201ENSMUST00000175065 101 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm24332-201ENSMUST00000175102 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25959-201ENSMUST00000175112 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm22475-201ENSMUST00000175169 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm22903-201ENSMUST00000175193 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25070-201ENSMUST00000175237 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm24159-201ENSMUST00000175264 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25299-201ENSMUST00000175283 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm23798-201ENSMUST00000175560 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm23802-201ENSMUST00000175565 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25708-201ENSMUST00000177687 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm24370-201ENSMUST00000178007 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm23049-201ENSMUST00000178068 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm28019-201ENSMUST00000178138 101 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25571-201ENSMUST00000178322 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25355-201ENSMUST00000178456 101 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm24975-201ENSMUST00000178492 101 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm23189-201ENSMUST00000178954 102 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm25100-201ENSMUST00000179750 101 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm23064-201ENSMUST00000179866 101 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm7627-201ENSMUST00000183205 999 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm2474-201ENSMUST00000195162 559 ntBASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col25a1Q99MQ5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm25766-201ENSMUST00000104101 131 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm10169-201ENSMUST00000121822 348 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm28686-201ENSMUST00000187404 609 ntBASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col25a1Q99MQ5 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms