Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.52□□□□□ -0.72
Scrt1Q99M85 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.52□□□□□ -0.72
Scrt1Q99M85 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Scrt1Q99M85 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Scrt1Q99M85 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.52□□□□□ -0.72
Scrt1Q99M85 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Scrt1Q99M85 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm23596-201ENSMUST00000104304 132 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm23153-201ENSMUST00000175323 313 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm9358-201ENSMUST00000183067 927 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Mir7677-201ENSMUST00000184226 67 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm43962-201ENSMUST00000203898 190 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm45550-201ENSMUST00000209380 946 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm270-201ENSMUST00000223010 976 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.52□□□□□ -0.73
Scrt1Q99M85 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Scrt1Q99M85 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Rmrp-201ENSMUST00000157463 271 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm4482-201ENSMUST00000200876 742 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.51□□□□□ -0.73
Scrt1Q99M85 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Snora73b-201ENSMUST00000083419 205 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.51□□□□□ -0.73
Scrt1Q99M85 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scrt1Q99M85 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms