Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Map1b-203ENSMUST00000223725 2669 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm11222-201ENSMUST00000119005 738 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm27320-201ENSMUST00000184892 109 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm38341-201ENSMUST00000195357 515 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm5950-201ENSMUST00000213337 772 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm8227-201ENSMUST00000223306 571 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm25214-201ENSMUST00000104573 129 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm6621-201ENSMUST00000193251 772 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm31256-201ENSMUST00000194705 506 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm42937-201ENSMUST00000197360 752 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Gm7783-201ENSMUST00000204795 781 ntBASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chmp1b1Q99LU0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Chmp1b1Q99LU0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms