Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.3□□□□□ -0.6
Taf11Q99JX1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.3□□□□□ -0.6
Taf11Q99JX1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Taf11Q99JX1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.29□□□□□ -0.6
Taf11Q99JX1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm22175-201ENSMUST00000175007 78 ntBASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Taf11Q99JX1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.28□□□□□ -0.6
Taf11Q99JX1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.28□□□□□ -0.6
Taf11Q99JX1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Taf11Q99JX1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms