Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb17Q91VD8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm13260-201ENSMUST00000117797 1264 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm13736-201ENSMUST00000119272 253 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm22698-201ENSMUST00000175375 108 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Mospd4-201ENSMUST00000180618 576 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Scgb2b1-201ENSMUST00000189372 338 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm37433-201ENSMUST00000192695 678 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm37441-201ENSMUST00000194430 678 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm43895-201ENSMUST00000203219 855 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm45458-201ENSMUST00000209900 522 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm7046-201ENSMUST00000221351 977 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 AC164297.5-201ENSMUST00000224365 198 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Cxcl2-201ENSMUST00000075433 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb17Q91VD8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Rubie-203ENSMUST00000227803 2430 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm15154-201ENSMUST00000117590 366 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm15238-201ENSMUST00000119938 1296 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm11480-201ENSMUST00000120214 659 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm43478-201ENSMUST00000200381 292 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Olfr284-202ENSMUST00000206647 966 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Gm45889-201ENSMUST00000209535 1057 ntBASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhb17Q91VD8 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms