Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm3508-201ENSMUST00000186012 792 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm38117-201ENSMUST00000194653 939 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm17831-201ENSMUST00000205579 900 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm45770-201ENSMUST00000212105 616 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm29787-201ENSMUST00000222129 849 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.83□□□□□ -0.36
TraipQ8VIG6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TraipQ8VIG6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm14193-201ENSMUST00000105067 153 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm22711-201ENSMUST00000116890 133 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm29499-201ENSMUST00000189151 486 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm28329-201ENSMUST00000191208 689 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm29171-201ENSMUST00000191397 486 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm42599-201ENSMUST00000201308 469 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm10179-201ENSMUST00000086233 688 ntBASIC12.82□□□□□ -0.36
TraipQ8VIG6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TraipQ8VIG6 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm13916-201ENSMUST00000117368 628 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm15131-201ENSMUST00000119124 595 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm8737-201ENSMUST00000122208 642 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm17391-201ENSMUST00000171036 126 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm9192-201ENSMUST00000183221 985 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm18352-201ENSMUST00000189113 902 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm6450-201ENSMUST00000200896 574 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Gm6108-201ENSMUST00000208365 367 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.81□□□□□ -0.36
TraipQ8VIG6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TraipQ8VIG6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms