Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.35□□□□□ -0.43
Trim60Q8VI40 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim60Q8VI40 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm24845-201ENSMUST00000158034 109 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 AY702102-202ENSMUST00000194651 1173 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm19994-201ENSMUST00000217086 586 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm9899-201ENSMUST00000065519 555 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trim60Q8VI40 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.34□□□□□ -0.43
Trim60Q8VI40 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim60Q8VI40 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim60Q8VI40 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.33□□□□□ -0.43
Trim60Q8VI40 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm11425-201ENSMUST00000119608 498 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm14441-201ENSMUST00000121960 540 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Snora78-201ENSMUST00000158630 128 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm6114-201ENSMUST00000182472 968 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm43133-201ENSMUST00000197472 463 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm9396-201ENSMUST00000076703 567 ntBASIC12.33□□□□□ -0.44
Trim60Q8VI40 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim60Q8VI40 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim60Q8VI40 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms