Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm12176-201ENSMUST00000121420 875 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm8959-201ENSMUST00000213150 571 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nkd2Q8VE28 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.93□□□□□ -0.66
Nkd2Q8VE28 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm11331-201ENSMUST00000119764 288 ntBASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm18730-201ENSMUST00000218038 343 ntBASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkd2Q8VE28 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkd2Q8VE28 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nkd2Q8VE28 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd2Q8VE28 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkd2Q8VE28 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms