Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm27375-201ENSMUST00000183799 107 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm17931-201ENSMUST00000208132 634 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nup35Q8R4R6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nup35Q8R4R6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm4984-201ENSMUST00000115987 360 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm15610-201ENSMUST00000120584 195 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm14999-201ENSMUST00000121039 624 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm13570-201ENSMUST00000140763 309 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Rprl1-201ENSMUST00000158050 327 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm38241-201ENSMUST00000192641 898 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Nup35Q8R4R6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms