Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm12164-201ENSMUST00000121695 551 ntBASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm13097-201ENSMUST00000210722 397 ntBASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim29Q8R2Q0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trim29Q8R2Q0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Gm7783-201ENSMUST00000204795 781 ntBASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim29Q8R2Q0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim29Q8R2Q0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Gm13296-201ENSMUST00000117854 997 ntBASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim29Q8R2Q0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms