Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rfwd3Q8CIK8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Gm38241-201ENSMUST00000192641 898 ntBASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rfwd3Q8CIK8 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm14130-201ENSMUST00000118417 987 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm13996-201ENSMUST00000118456 430 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.25□□□□□ -0.61
Rfwd3Q8CIK8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms