Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm13611-201ENSMUST00000118269 318 ntBASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm14999-201ENSMUST00000121039 624 ntBASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm3508-201ENSMUST00000186012 792 ntBASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.94□□□□□ -0.18
Vps53Q8CCB4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm10076-201ENSMUST00000073238 384 ntBASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.94□□□□□ -0.18
Vps53Q8CCB4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm6963-201ENSMUST00000147879 379 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm9550-201ENSMUST00000161130 862 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm32999-201ENSMUST00000192693 562 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm44958-201ENSMUST00000203734 736 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm45118-201ENSMUST00000208928 825 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm39404-201ENSMUST00000216350 313 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.93□□□□□ -0.18
Vps53Q8CCB4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.92□□□□□ -0.18
Vps53Q8CCB4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Gm7003-201ENSMUST00000195089 312 ntBASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Gm35960-201ENSMUST00000202712 767 ntBASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps53Q8CCB4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps53Q8CCB4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms