Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Mir1247-201ENSMUST00000116706 82 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm14921-201ENSMUST00000118643 908 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm24548-201ENSMUST00000158650 108 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm27501-201ENSMUST00000183599 107 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm42599-201ENSMUST00000201308 469 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm18935-201ENSMUST00000212692 664 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm15198-201ENSMUST00000117283 177 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm5904-201ENSMUST00000210286 865 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Gm10608-202ENSMUST00000213924 676 ntBASIC10.69□□□□□ -0.7
Rft1Q8C3B8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.69□□□□□ -0.7
Rft1Q8C3B8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms