Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Gm12579-201ENSMUST00000118040 783 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Gm7666-201ENSMUST00000146631 819 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sh3rf2Q8BZT2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm8731-201ENSMUST00000118088 412 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm11667-201ENSMUST00000119828 486 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm29499-201ENSMUST00000189151 486 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm28329-201ENSMUST00000191208 689 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm29171-201ENSMUST00000191397 486 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm17831-201ENSMUST00000205579 900 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm6867-201ENSMUST00000219165 425 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sh3rf2Q8BZT2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Map1b-203ENSMUST00000223725 2669 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sh3rf2Q8BZT2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms