Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm12579-201ENSMUST00000118040 783 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm4310-201ENSMUST00000177847 889 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm23771-201ENSMUST00000178702 110 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm43186-201ENSMUST00000198130 824 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm7600-201ENSMUST00000209657 785 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm2553-201ENSMUST00000215986 605 ntBASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm11949-201ENSMUST00000117640 372 ntBASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm16397-201ENSMUST00000122201 494 ntBASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm9645-201ENSMUST00000197131 792 ntBASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.65□□□□□ -0.38
Rd3Q8BRE0 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rd3Q8BRE0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rd3Q8BRE0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rd3Q8BRE0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms