Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm14660-201ENSMUST00000119809 575 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm11424-201ENSMUST00000121929 829 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chmp2bQ8BJF9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chmp2bQ8BJF9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm13226-201ENSMUST00000117838 404 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm4986-201ENSMUST00000119731 549 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm25043-201ENSMUST00000158604 212 ntBASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.23□□□□□ -0.45
Chmp2bQ8BJF9 Gm2546-201ENSMUST00000182630 991 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms