Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm5706-201ENSMUST00000181525 993 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm19287-201ENSMUST00000203190 358 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm44124-201ENSMUST00000204159 472 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm44100-201ENSMUST00000204329 436 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12616-201ENSMUST00000118594 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm8566-201ENSMUST00000120174 465 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm23699-201ENSMUST00000158835 135 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12624-201ENSMUST00000177615 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12621-201ENSMUST00000177760 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12615-201ENSMUST00000177970 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12622-201ENSMUST00000177975 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12627-201ENSMUST00000178412 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12625-201ENSMUST00000179122 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12614-201ENSMUST00000179586 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm12613-201ENSMUST00000180323 382 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm18893-201ENSMUST00000198416 943 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm9797-202ENSMUST00000218003 294 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh19Q80TF3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm23251-201ENSMUST00000103773 110 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm12165-201ENSMUST00000117047 342 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm13408-201ENSMUST00000119822 798 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm13935-201ENSMUST00000121859 798 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm6546-201ENSMUST00000192096 766 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm17931-201ENSMUST00000208132 634 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.74□□□□□ -0.53
Pcdh19Q80TF3 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms