Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm9211-201ENSMUST00000182882 975 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdh8Q7TSK3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm11511-201ENSMUST00000118146 540 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm9550-201ENSMUST00000161130 862 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm9555-201ENSMUST00000200908 583 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh8Q7TSK3 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm24891-201ENSMUST00000104391 136 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm12165-201ENSMUST00000117047 342 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm13408-201ENSMUST00000119822 798 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm13935-201ENSMUST00000121859 798 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm3332-201ENSMUST00000189337 928 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm37246-201ENSMUST00000192665 835 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm44882-201ENSMUST00000205702 802 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms