Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm16296-201ENSMUST00000159905 325 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm8226-201ENSMUST00000190511 798 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm43249-201ENSMUST00000200464 458 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm8181-201ENSMUST00000062242 669 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm4978-201ENSMUST00000071565 801 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm14227-201ENSMUST00000119431 629 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm25830-201ENSMUST00000158923 132 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm11509-201ENSMUST00000117358 325 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 BC080696-201ENSMUST00000202858 1218 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Rif1Q6PR54 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.12□□□□□ -0.79
Rif1Q6PR54 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.12□□□□□ -0.79
Rif1Q6PR54 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms