Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm7857-201ENSMUST00000117957 358 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm15711-201ENSMUST00000118889 535 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Sdc3Q64519 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm37666-201ENSMUST00000194110 866 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm19208-201ENSMUST00000213861 912 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.54□□□□□ -0.56
Sdc3Q64519 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Sdc3Q64519 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sdc3Q64519 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.54□□□□□ -0.56
Sdc3Q64519 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm12380-201ENSMUST00000119012 544 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Mir6979-201ENSMUST00000183927 56 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm18753-201ENSMUST00000201000 566 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.53□□□□□ -0.56
Sdc3Q64519 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sdc3Q64519 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sdc3Q64519 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sdc3Q64519 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.52□□□□□ -0.56
Sdc3Q64519 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Sdc3Q64519 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sdc3Q64519 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sdc3Q64519 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sdc3Q64519 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.52□□□□□ -0.56
Sdc3Q64519 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sdc3Q64519 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sdc3Q64519 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sdc3Q64519 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sdc3Q64519 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.52□□□□□ -0.57
Sdc3Q64519 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms